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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs72978923 chr1:111149907 A/G DLD chr7:107531415-107572175:+ -0.27 -6.4 3.71E-10 Box Plot
THCA rs72980706 chr1:109185439 G/A NKIRAS1 chr3:23933151-23988082:- -0.43 -6.06 2.81E-9 Box Plot
THCA rs73075647 chr3:47043386 C/T HAGH chr16:1845621-1877195:- 0.26 5.95 5.16E-9 Box Plot
THCA rs73095617 chr20:17388478 A/T PNLIP chr10:118305443-118327367:+ 0.2 6.01 3.7E-9 Box Plot
THCA rs73111428 chr5:65598694 G/T USP33 chr1:78161672-78225537:- -0.32 -6.1 2.21E-9 Box Plot
THCA rs7312770 chr12:56467587 C/T RPS26P11 chrX:71264395-71264742:+ -0.59 -11.89 9.29E-29 Box Plot
THCA rs73136144 chr7:65066861 A/T RABGEF1 chr7:66147151-66276451:+ 0.49 6.44 2.86E-10 Box Plot
THCA rs73143703 chr3:90281792 C/T STX19 chr3:93733213-93747454:- 0.43 6.37 4.42E-10 Box Plot
THCA rs73143751 chr3:90378437 C/T STX19 chr3:93733213-93747454:- 0.49 6.95 1.17E-11 Box Plot
THCA rs73143768 chr3:90413795 T/C STX19 chr3:93733213-93747454:- 0.49 6.65 7.82E-11 Box Plot
THCA rs73149661 chr3:23277323 C/T PRDM5 chr4:121606074-121844025:- -0.22 -5.92 6.04E-9 Box Plot
THCA rs73153370 chr3:90056125 T/A STX19 chr3:93733213-93747454:- 0.42 6.15 1.6E-9 Box Plot
THCA rs73153385 chr3:90100056 T/A STX19 chr3:93733213-93747454:- 0.49 6.56 1.4E-10 Box Plot
THCA rs7315339 chr12:25401701 C/T EIF5B chr2:99953816-100017789:+ 0.29 6.02 3.46E-9 Box Plot
THCA rs73162818 chr3:146493396 A/G PPIP5K1 chr15:43825660-43882451:- 0.44 5.94 5.63E-9 Box Plot